Lien vers la collection HAL BioEcoAgro ULCO : ici
Duman S., Doyen P., Merveillie P., Andersson N., Bayeuil R., Grard T., Dehaut A. & Duflos G., (2023). Optimization of a method designed to extract and characterize microplastics in different packaged fish products Food Control, 154 : p. 110029. https://doi.org/10.1016/j.foodcont.2023.110029
Mougin J., Lobanov V., Danion M., Roquigny R., Goardon L., Grard T., Morin T., Labbé L. & Joyce A., (2023) Effects of dietary co-exposure to fungal and herbal functional feed additives on immune parameters and microbial intestinal diversity in rainbow trout (Oncorhynchus mykiss) Fish & Shellfish Immunology, : p. 108773. https://doi.org/10.1016/j.fsi.2023.108773
Bouchendhomme, T., Soret, M., Grard, T. et Lencel, P. (2023) Differentiating between fresh and frozen-thawed fish fillets by muscle fibre permeability measurement. Food Control, p 109567. https://doi.org/10.1016/j.foodcont.2022.109567
Akoueson, F., Chbib, C., Brémard, A., Monchy, S., Paul-Pont, I., Doyen, P., Dehaut, A. et Duflos, G. (2022) Identification of plastic additives: Py/TD-GC-HRMS method development and application on food containers. Journal of Analytical and Applied Pyrolysis168, p 105745. https://doi.org/10.1016/j.jaap.2022.105745
Bouchendhomme, T., Soret, M., Devin, A., Pasdois, P., Grard, T. et Lencel, P. (2022) Differentiating between fresh and frozen-thawed fish fillets by mitochondrial permeability measurement. Food Control, p 109197. https://doi.org/10.1016/j.foodcont.2022.109197
Bourdonnais, E., Brauge, T., Debuiche, S., Le Bris, C. et Midelet, G. (2022a) Evaluation of Bacterial DNA Extraction Methods on Marine Samples Integrating a Process Control. Molecular Biology: open access 11, 10.
Bourdonnais, E., Colcanap, D., Le Bris, C., Brauge, T. et Midelet, G. (2022b) Occurrence of indicator genes of antimicrobial resistance contamination in the English Channel and north sea sectors and interactions with environmental variables. Frontiers in Microbiology 13. https://doi.org/10.3389/fmicb.2022.883081
Lavelle, K., Sadovskaya, I., Vinogradov, E., Kelleher, P., Lugli, G. A., Ventura, M., van Sinderen, D. et Mahony, J. (2022a) Bipartite rgp Locus Diversity in Streptococcus thermophilus Corresponds to Backbone and Side Chain Differences of Its Rhamnose-Containing Cell Wall Polysaccharide. Applied and Environmental Microbiology, pp e01504-22.
Lavelle, K., Sadovskaya, I., Vinogradov, E., Kelleher, P., Lugli, G. A., Ventura, M., van Sinderen, D. et Mahony, J. (2022b) Brussowvirus SW13 Requires a Cell Surface-Associated Polysaccharide To Recognize Its Streptococcus thermophilus Host. Applied and environmental microbiology 88, 1, pp e01723-21.
Pasquier, G., Doyen, P., Carlesi, N. et Amara, R. (2022a) An innovative approach for microplastic sampling in all surface water bodies using an aquatic drone. Heliyon8, 11. 10.1016/j.heliyon.2022.e11662
Pasquier, G., Doyen, P., Kazour, M., Dehaut, A., Diop, M., Duflos, G. et Amara, R. (2022b) Manta Net: The Golden Method for Sampling Surface Water Microplastics in Aquatic Environments. Frontiers in Environmental Science 10. https://doi.org/10.3389/fenvs.2022.811112
Ruiz‐Cruz, S., Erazo Garzon, A., Kelleher, P., Bottacini, F., Breum, S. Ø., Neve, H., Heller, K. J., Vogensen, F. K., Palussière, S. et Courtin, P. (2022) Host genetic requirements for DNA release of lactococcal phage TP901‐1. Microbial Biotechnology.
Soret, M., Bouchendhomme, T., Cleach, J., Jouy, N., Crola Da Silva, C., Devin, A., Grard, T. et Lencel, P. (2022) Measurement of fish freshness: flow cytometry analysis of isolated muscle mitochondria. Food Chemistry 373, p 131690. https://doi.org/10.1016/j.foodchem.2021.131690arres.2015.06.001
Dayras, P., Bialais, C., Sadovskaya, I., Lee, M.-C., Lee, J.-S. et Souissi, S. (2021) Microalgal Diet Influences the Nutritive Quality and Reproductive Investment of the Cyclopoid Copepod Paracyclopina nana. Frontiers in Marine Science 8, 1147.
Junique, L., Watier, L., Lejeune, H., Viudes, F., Deblieck, M. et Watier, D. (2021) Determination by response surface methodology of optimal protein and phycocyanin productivity conditions in Arthrospira (Spirulina) platensis under different combinations of photoperiod variation and lighting intensity. Bioresource Technology Reports 15, p 100763
Mougin, J., Roquigny, R., Flahaut, C., Bonnin-Jusserand, M., Grard, T. et Le Bris, C. (2021) Abundance and spatial patterns over time of Vibrionaceae and Vibrio harveyi in water and biofilm from a seabass aquaculture facility. Aquaculture 542, p 736862.
Akoueson, F., Chbib, C., Monchy, S., Paul-Pont, I., Doyen, P., Dehaut, A. et Duflos, G. (2021) Identification and quantification of plastic additives using pyrolysis-GC/MS: A review. Science of The Total Environment 773, p 145073.
Roquigny, R., Mougin, J., Le Bris, C., Bonnin-Jusserand, M., Doyen, P. et Grard, T. (2021) Characterization of the marine aquaculture microbiome: A seasonal survey in a seabass farm. Aquaculture 531, p 735987.
Copin, S., Mougin, J., Raguenet, V., Robert-Pillot, A., Midelet, G., Grard, T. et Bonnin-Jusserand, M. (2020) Ethidium and propidium monoazide: comparison of potential toxicity on Vibrio spp. viability. Letters in Applied Microbiology
Mougin, J., Flahaut, C., Roquigny, R., Bonnin-Jusserand, M., Grard, T. et Le Bris, C. (2020a) Rapid Identification of Vibrio Species of the Harveyi Clade Using MALDI-TOF MS Profiling With Main Spectral Profile Database Implemented With an In-House Database: Luvibase. Frontiers in Microbiology 11, 2494.
Mahony, J., Frantzen, C., Vinogradov, E., Sadovskaya, I., Theodorou, I., Kelleher, P., Chapot-Chartier, M.-P., Cambillau, C., Holo, H. et van Sinderen, D. (2020) The CWPS Rubik’s cube: Linking diversity of cell wall polysaccharide structures with the encoded biosynthetic machinery of selected Lactococcus lactis strains. Mol Microbiol.
Guerardel, Y., Sadovskaya, I., Maes, E., Furlan, S., Chapot-Chartier, M.-P., Mesnage, S., Rigottier-Gois, L. et Serror, P. (2020) Complete Structure of the Enterococcal Polysaccharide Antigen (EPA) of Vancomycin-Resistant Enterococcus faecalis V583 Reveals that EPA Decorations Are Teichoic Acids Covalently Linked to a Rhamnopolysaccharide Backbone. mBio 11, 2.
Pan, Y. J., Déposé, E., Souissi, A., Hénard, S., Schaadt, M., Mastro, E. et Souissi, S. (2020) Assessments of first feeding protocols on the larviculture of California grunion Leuresthes tenuis (Osteichthyes: Atherinopsidae). Aquaculture Research. 51, pp 3054-3058
Cléach, J., Soret, M., Grard, T. et Lencel, P. (2020) Assessment of fish freshness based on fluorescence measurement of mitochondrial membrane potential. Food Control 115, p 107301.
McDonnell, B., Hanemaaijer, L., Bottacini, F., Kelleher, P., Lavelle, K., Sadovskaya, I., Vinogradov, E., Ver Loren van Themaat, E., Kouwen, T., Mahony, J. et van Sinderen, D. (2020) A cell wall-associated polysaccharide is required for bacteriophage adsorption to the Streptococcus thermophilus cell surface. Molecular Microbiology, 114, pp 31-45
Mougin, J., Roquigny, R., Travers, M.-A., Grard, T., Bonnin-Jusserand, M. et Le Bris, C. (2020b) Development of a mreB-targeted real-time PCR method for the quantitative detection of Vibrio harveyi in seawater and biofilm from aquaculture systems. Aquaculture, p 735337.
Theodorou, I., Courtin, P., Sadovskaya, I., Palussière, S., Fenaille, F., Mahony, J., Chapot-Chartier, M.-P. et van Sinderen, D. (2020) Three distinct glycosylation pathways are involved in the decoration of Lactococcus lactis cell wall glycopolymers. Journal of Biological Chemistry. 295, pp 5519-5532.
Sadovskaya, I. et Guérardel, Y. (2019) Simple Protocol to Purify Cell Wall Polysaccharide from Gram-Positive Bacteria and Assess Its Structural Integrity dans Bacterial Polysaccharides: Methods and Protocols (Brockhausen, I., Ed.) pp 37-45, Springer New York, New York, NY. I.S.B.N.: 978-1-4939-9154-9
Doyen, P., Hermabessiere, L., Dehaut, A., Himber, C., Decodts, M., Degraeve, T., Delord, L., Gaboriaud, M., Moné, P., Sacco, J., Tavernier, E., Grard, T. et Duflos, G. (2019) Occurrence and identification of microplastics in beach sediments from the Hauts-de-France region. Environmental Science and Pollution Research
Mougin, J., Copin, S., Bojolly, D., Raguenet, V., Robert-Pillot, A., Quilici, M.-L., Midelet-Bourdin, G., Grard, T. et Bonnin-Jusserand, M. (2019) Adhesion to stainless steel surfaces and detection of viable but non cultivable cells of Vibrio parahaemolyticus and Vibrio cholerae isolated from shrimps in seafood processing environments: Stayin’ alive? Food Control 102C, pp 122-130.
Cléach, J., Pasdois, P., Marchetti, P., Watier, D., Duflos, G., Goffier, E., Lacoste, A.-S., Slomianny, C., Grard, T. et Lencel, P. (2019) Mitochondrial activity as an indicator of fish freshness. Food Chemistry 287, pp 38-45.
Maes, E., Sadovskaya, I., Lévêque, M., Elass-Rochard, E., Payré, B., Grard, T., Théodorou, V., Guérardel, Y. et Mercier-Bonin, M. (2019) Structure and biological activities of a hexosamine-rich cell wall polysaccharide isolated from the probiotic Lactobacillus farciminis. Glycoconjugate Journal, pp 1-17.
Marlard, S., Doyen, P. et Grard, T. (2019) Rapid multiparameters approach to differentiate fresh skinless sea bass (Dicentrarchus labrax) fillets from frozen-thawed ones. Journal of Aquatic Food Product Technology, pp 1-10.
Pan, Y. J., Souissi, A., Sadovskaya, I., Hwang, J. S. et Souissi, S. (2019) Egg hatching rate and fatty acid composition of Acartia bilobata (Calanoida, Copepoda) across cold storage durations. Aquaculture Research 50, 2, pp 483-489.
Zidour, M., Boubechiche, Z., Pan, Y.-J., Bialais, C., Cudennec, B., Grard, T., Drider, D., Flahaut, C., Ouddane, B. et Souissi, S. (2019) Population response of the estuarine copepod Eurytemora affinis to its bioaccumulation of trace metals. Chemosphere 220, pp 505-513.
Bonnin-Jusserand, M., Copin, S., Le Bris, C., Brauge, T., Gay, M., Brisabois, A., Grard, T. et Midelet-Bourdin, G. (2019) Vibrio species involved in seafood-borne outbreaks (Vibrio cholerae, V. parahaemolyticus and V. vulnificus): review of microbiological versus recent molecular detection methods in seafood products. Critical Reviews in Food Science and Nutrition 59, 4, pp 597-610.
Zidour, M., Boubechiche, Z., Pan, Y.-J., Bialais, C., Cudennec, B., Grard, T., Drider, D., Flahaut, C., Ouddane, B. et Souissi, S. (2018b) Population response of the estuarine copepod Eurytemora affinis to its bioaccumulation of trace metals. Chemosphere
Zidour, M., Belguesmia, Y., Cudennec, B., Grard, T., Flahaut, C., Souissi, S. et Drider, D. (2018a) Genome Sequencing and Analysis of Bacillus pumilus ICVB403 Isolated from Acartia tonsa Copepod Eggs Revealed Surfactin and Bacteriocin Production: Insights on Anti-Staphylococcus Activity. Probiotics and antimicrobial proteins, pp 1-9.
Cléach, J., Watier, D., Le Fur, B., Brauge, T., Duflos, G., Grard, T. et Lencel, P. (2018) Use of ratiometric probes with a spectrofluorometer for bacterial viability measurement. Journal of microbiology and biotechnology
Zeyer, E., Heuson, E., Himber, C., Phalip, V., Le Bris, C., Dhulster, P., Brisabois, A., Flahaut, C., Cudennec, B., Grard, T. et Duflos, G. (2018) Novel approach to identify phenoloxidases inhibitors: Optimization of spectrophotometric MBTH assay for high throughput use enzymatic assays and analysis. Food Control 93, pp 83-91
Vinogradov, E., Sadovskaya, I., Courtin, P., Kulakauskas, S., Grard, T., Mahony, J., van Sinderen, D. et Chapot-Chartier, M.-P. (2018) Determination of the cell wall polysaccharide and teichoic acid structures from Lactococcus lactis IL1403. Carbohydrate Research 462, pp 39-44
Vinogradov, E., Sadovskaya, I., Grard, T., Murphy, J., Mahony, J., Chapot-Chartier, M.-P. et van Sinderen, D. (2018) Structural studies of the cell wall polysaccharide from Lactococcus lactis UC509.9. Carbohydrate Research
Brauge, T., Faille, C., Sadovskaya, I., Charbit, A., Benezech, T., Shen, Y., Loessner, M. J., Bautista, J. R. et Midelet-Bourdin, G. (2018) The absence of N-acetylglucosamine in wall teichoic acids of Listeria monocytogenes modifies biofilm architecture and tolerance to rinsing and cleaning procedures. PloS one 13, 1, p e0190879
Zidour, M., Chevalier, M., Belguesmia, Y., Cudennec, B., Grard, T., Drider, D., Souissi, S. et Flahaut, C. (2017) Isolation and characterization of bacteria colonizing Acartia tonsa copepod eggs and displaying antagonist effects against Vibrio anguillarum, Vibrio alginolyticus and other pathogenic strains. Frontiers in Microbiology 8, 1919.
Zébré, A., N’Diaye, A., Drider, D., Duflos, G., Biaggini, K., Feuilloley, M., Bonnin-Jusserand, M., Connil, N., Déchelotte, P. et Boukherroub, R. (2017) Substance P enhances lactic acid and tyramine production in Enterococcus faecalis V583 and promotes its cytotoxic effect on intestinal Caco-2/TC7 cells. Gut pathogens 9, 1, p 20
Sadovskaya, I., Vinogradov, E., Courtin, P., Armalyte, J., Meyrand, M., Giaouris, E., Palussiere, S., Furlan, S., Pechoux, C., Ainsworth, S., Mahony, J., van Sinderen, D., Kulakauskas, S., Guerardel, Y. et Chapot-Chartier, M. P. (2017) Another brick in the wall: a rhamnan polysaccharide trapped inside peptidoglycan of Lactococcus lactis. MBio 8, 5
Dieterle, M. E., Spinelli, S., Sadovskaya, I., Piuri, M. et Cambillau, C. (2017) Evolved distal tail carbohydrate binding modules of Lactobacillus phage J-1: a novel type of anti-receptor widespread among lactic acid bacteria phages. Mol Microbiol 104, 4, pp 608-620.
Pan, Y.-J., Souissi, A., Sadovskaya, I., Hansen, B. W., Hwang, J.-S. et Souissi, S. (2017) Effects of cold selective breeding on the body length, fatty acid content, and productivity of the tropical copepod Apocyclops royi (Cyclopoida, Copepoda). Journal of Plankton Research, pp 1-10
Diop, M., Net, S., Howsam, M., Lencel, P., Watier, D., Grard, T., Duflos, G., Diouf, A. et Amara, R. (2017). Concentrations and potential human health risks of trace metals (Cd, Pb, Hg) and selected organic pollutants (PAHs, PCBs) in fish and seafood from the Senegalese coast. International Journal of Environmental Research, 1-10
Gnouma, A., Sadovskaya, I., Souissi, A., Sebai, K., Medhioub, A., Grard, T. et Souissi, S. (2017) Changes in fatty acids profile, monosaccharide profile and protein content during batch growth of Isochrysis galbana (T.iso). Aquaculture Research
Bojolly, D., Doyen, P., Le Fur, B., Christaki, U., Verrez-Bagnis, V. et Grard, T. (2017) Development of a qPCR method for the identification and quantification of two closely related tuna species, bigeye tuna (Thunnus obesus) and yellowfin tuna (Thunnus albacares) in canned tuna, Journal of Agricultural and Food Chemistry, 65, pp 913-920 https://pubs.acs.org/doi/abs/10.1021/acs.jafc.6b04713
Karoui, R., Hassoun, A. et Ethuin, P. (2017) Front face fluorescence spectroscopy enables rapid differentiation of fresh and frozen-thawed sea bass (Dicentrarchus labrax) fillets. Journal of Food Engineering https://dx.doi.org/10.1016/j.jfoodeng.2017.01.018
Renzi, F., Ittig, S. J., Sadovskaya, I., Hess, E., Lauber, F., Dol, M., Shin, H., Mally, M., Fiechter, C., Sauder, U., Chami, M. et Cornelis, G. R. (2016) Evidence for a LOS and a capsular polysaccharide in Capnocytophaga canimorsus. Scientific Reports 6, p 38914. https://dx.doi.org/10.1038/srep38914
Brauge, T., Sadovskaya, I., Faille, C., Benezech, T., Maes, E., Guerardel, Y. et Midelet-Bourdin, G. (2016) Teichoic acid is the major polysaccharide present in the Listeria monocytogenes biofilm matrix. FEMS Microbiology Letters 363, 2. https://academic.oup.com/femsle/article/363/2/fnv229/2600009/Teichoic-acid-is-the-major-polysaccharide-present
Cornelissen, A., Sadovskaya, I., Vinogradov, E., Blangy, S., Spinelli, S., Casey, E., Mahony, J., Noben, J.-P., Dal Bello, F., Cambillau, C. et van Sinderen, D. (2016) The baseplate of Lactobacillus delbrueckii bacteriophage Ld17 harbours a glycerophosphodiesterase. Journal of Biological Chemistry. https://www.jbc.org/content/291/32/16816.short
Dehaut, A., Duthen, S., Grard, T., Krzewinski, F., N’Guessan, A., Brisabois, A. et Duflos, G. (2016a) Development of an SPME-GC-MS method for the specific quantification of dimethylamine and trimethylamine: use of a new ratio for the freshness monitoring of cod fillets. Journal of the Science of Food and Agriculture, 6, 3787-3794. https://onlinelibrary.wiley.com/doi/10.1002/jsfa.7570/pdf
Dehaut, A., Krzewinski, F., Grard, T., Chollet, M., Jacques, P., Brisabois, A. et Duflos, G. (2016b) Monitoring the freshness of fish: development of a qPCR method applied to MAP chilled whiting. Journal of the Science of Food and Agriculture 96, 6, pp 2080-2089. https://onlinelibrary.wiley.com/doi/10.1002/jsfa.7322/pdf
Diop, M., Watier, D., Masson, P.-Y., Diouf, A., Amara, R., Grard, T. et Lencel, P. (2016) Assessment of freshness and freeze-thawing of sea bream fillets (Sparus aurata) by a cytosolic enzyme: Lactate dehydrogenase. Food Chemistry 210, pp 428-434. https://dx.doi.org/10.1016/j.foodchem.2016.04.136
Havrez, C., Lepreux, S., Lebrun, Y., Haudegond, S., Ethuin, P. et Kolski, C. (2016) A Design Model for Tangible Interaction: Case Study in Waste Sorting. IFAC-PapersOnLine 49, 19, pp 373-378. https://dx.doi.org/10.1016/j.ifacol.2016.10.594
Le Bris, C., Cudennec, B., Dhulster, P., Drider, D., Duflos, G. et Grard, T. (2016) Melanosis in Penaeus monodon: involvement of the laccase-like activity of hemocyanin. Journal of Agricultural and Food Chemistry 64, 3, pp 663-670. https://pubs.acs.org/doi/abs/10.1021/acs.jafc.5b04997
Vinogradov, E., Sadovskaya, I., Grard, T. et Chapot-Chartier, M. P. (2016) Structural studies of the rhamnose-rich cell wall polysaccharide of Lactobacillus casei BL23. Carbohydr Res 435, pp 156-161. https://dx.doi.org/10.1016/j.carres.2016.10.002
Ayé, A., Bonnin-Jusserand, M., Brian-Jaisson, F., Ortalo-Magné, A., Culioli, G., Koffi, N. R., Rabah, N., Blache, Y. et Molmeret, M. (2015) Modulation of violacein production and phenotypes associated with biofilm by exogenous quorum sensing AHLs in the marine bacterium Pseudoalteromonas ulvae TC14. Microbiology (Reading, England). https://mic.microbiologyresearch.org/content/journal/micro/10.1099/mic.0.000147
Dehaut, A., Krzewinski, F., Grard, T., Chollet, M., Jacques, P., Brisabois, A. et Duflos, G. (2015) Monitoring the freshness of fish: development of a qPCR method applied to MAP chilled whiting. Journal of the Science of Food and Agriculture, 96, 2080 – 2089. https://onlinelibrary.wiley.com/doi/10.1002/jsfa.7322/pdf
Ethuin, P., Marlard, S., Delosière, M., Carapito, C., Delalande, F., Van Dorsselaer, A., Dehaut, A., Lencel, V., Duflos, G. et Grard, T. (2015) Differentiation between fresh and frozen–thawed sea bass (Dicentrarchus labrax) fillets using two-dimensional gel electrophoresis. Food Chemistry 176, pp 294-301. https://dx.doi.org/10.1016/j.foodchem.2014.12.065
Jennings, L. K., Storek, K. M., Ledvina, H. E., Coulon, C., Marmont, L. S., Sadovskaya, I., Secor, P. R., Tseng, B. S., Scian, M., Filloux, A., Wozniak, D. J., Howell, P. L. et Parsek, M. R. (2015) Pel is a cationic exopolysaccharide that cross-links extracellular DNA in the Pseudomonas aeruginosa biofilm matrix. Proc Natl Acad Sci U S A 112, 36, pp 11353-8. https://www.pnas.org/content/112/36/11353.short
Vinogradov, E., Sadovskaya, I., Cornelissen, A. et van Sinderen, D. (2015) Structural investigation of cell wall polysaccharides of Lactobacillus delbrueckii subsp. bulgaricus 17. Carbohydr Res 413, pp 93-9. https://dx.doi.org/10.1016/j.carres.2015.06.001
